
Colorado Benthic Macroinvertebrates
Exploring how Benthic Macroinvertebrates assist in determining the status of the Aquatic Life Use for surface waters in Colorado

Benthic Macroinvertebrate (aquatic insects) found in stream bends can indicate the health of a stream or river. Monitoring and assessing of the benthic macroinvertebrates is important in order to target resources to achieve the goals of the federal Clean Water Act (CWA) and the Colorado Water Quality Control Act (CWQCA), which is to restore, maintain, protect, and improve the quality of our water resources 1 . 1 See Colorado Water Quality Control Act, § 25-8-102(2), C.R.S.; Federal Clean Water Act, § 101(a), 33 U.S.C. § 1251(a).

Photo by Blake Beyea
The Water Quality Control Division (WQCD) monitors and assesses benthic macroinvertebrates to assist in determining the status of the Aquatic Life Use. The assigned classified uses for a waterbody can also be for the expected or future condition of that waterbody. For Colorado, there are five different categories of classified uses that were adopted by the Colorado Water Quality Control Commission . The five categories are: 1) Agriculture; 2) Domestic Water Supply; 3) Recreation; 4) Wetlands; and 5) Aquatic Life.
For further information regarding the Colorado Water Quality Control Division's benthic macroinvertebrate monitoring and assessment program, please contact the following WQCD staff: Assessments and Collection- Scott Garncarz (scott.garncarz@state.co.us) Policy 10-1 - Chris Theel (christopher.theel@state.co.us) Standards - Blake Beyea (blake.beyea@state.co.us)

Photo by Blake Beyea
Laws, Regulations, and Policies
These are the laws, regulations, and policies that guide the WQCD's use of benthic macroinvertebrates for the assessment of the Aquatic Life Use.
Federal Clean Water Act:
Due to public concerns and awareness of water pollution in the country, amendments were made to the 1948 Federal Water Pollution Control Act to create what is now referred to the federal Clean Water Act (CWA) ( EPA, 2021 ). The CWA's primary objective is to "restore and maintain the chemical, physical, and biological integrity of the Nation's waters".
Colorado Water Quality Control Act:
The Colorado Water Quality Control Act was established in 1987 and further protects waters located within the State of Colorado.
Basic Standards and Methodologies for Surface Water
Regulation No. 31 provides a system for classifying state surface waters; for assigning water quality standards; for granting temporary modifications and for periodic review of the classifications and standards.
Policy Statement 10-1: Aquatic Life Use Attainment, Methodology to Determine Use Attainment for Rivers and Streams:
Policy 10-1 provides the Colorado Water Quality Control Commission (WQCC) detailed cumulative results of regulatory actions taken by the WQCC on how benthic macroinvertebrates are used to determine the status of the aquatic life use.
The following timeline shows the major developmental moments from initiation of the aquatic life workgroup to the approval of the updated Policy 10-1, which is currently in use.
Policy 10-1 Timeline
June 2000
EPA request states incorporate bioassessment and biocriteria as major components of their standards and monitoring programs, the WQCD established the Aquatic Life Workgroup
2002-2010
Aquatic Life Workgroup developed information on the “expected condition” was and how it could be used in CO’s regulatory framework.
2004
WQCC reviews the "expected condition" approach.
2005
WQCC opted not pursue the "expected condition" approach at the Rule Making Hearing (RMH) for Regulation No. 31, and targeted the 2010 Regulation No. 31 RMH.
2009
WQCC decided to to move ahead with the "expected condition" approach in an Administration Action Hearing in October 2010
October 2010
Policy Statement 10-1, Aquatic Life Use Attainment, Methodology to Determine Use Attainment for Rivers and Streams was adopted by the WQCC.
2017
Policy 10-1 was updated and is currently in use.
In total there were 41 stakeholder meetings, and took over 8 years to establish Policy 10-1.
Policy 10-1 will expire on 12/31/2025, updates on when the stakeholder process will occur will be posted when available.
Data Collection
The WQCD's preferred method for collecting benthic macroinvertebrates from a perennial and wadable stream is the semi-quantitative method known as the kick-net method.
Click the button below to learn how to collect benthic macroinvertebrates using the WQCD's preferred kick-net method.
Data Processing:
Ecological Data Application System (EDAS)
EDAS - is the name of the Microsoft Access database that the WQCD uses for calculating the MMI score, along with the auxiliary metrics and Tolerance Indicator Values (TIV) for sediment assessments. The MMI tool is built into EDAS.
There are 2 import sheets used to input data into EDAS: Stations Predictors Import File , and Master Bug Import File
The New Taxa File is only needed when new taxa are encountered.
Instructions on how to use EDAS are located in the Tutorial Guide to EDAS
*You cannot upload a google doc in EDAS, you will need to down load the documents in Microsoft Excel. For a copy of EDAS please contact: Scott Garncarz - scott.garncarz@state.co.us or Chris Theel - christopher.theel@state.co.us
Assessment of Benthic Macroinvertebrate Data
Listing Methodology
The Listing Methodology is a document that establishes the framework for determining the status of the water quality using the designated uses and standards adopted for that waterbody.
Photo by Patrick Bachmann
Information specifically for the assessment of the Biological and Physical Data (benthic macroinvertebrates) is located in Section V.E . The assessment of the benthic macroinvertebrates starts with the calculation of a Multi-Metric Index (MMI) score, which is the unitless score from 0-100. This score is calculated for each sample that is collected. A single sample is considered representative of a waterbody. The calculated MMI score is then compared to thresholds for the associated biotype to determine attainment or impairment. High MMI scores reflect a healthy benthic macroinvertebrate community.
Assessment Process
Assessment decisions are based on the information provided in the Compilation of Macroinvertebrate Data, which can be retrieved by clicking the following button.
The Compilation of Macroinvertebrate Data has multiple tabs. The Introduction tab is self explanatory, the Rationales tab is the tab used for the assessments of benthic macroinvertebrates (contains the MMI score and WBID), the All tab provides all the station information and assessment determinations, and the All-Benthics tab contains all the "raw" data for the stations. The raw data consists of the benthic macroinvertebrate species count as reported by the taxonomist, and the other is the 300-fixed count that operates the MMI tool. This compilation of data includes all benthic macroinvertebrate data submitted to the WQCD.
Photo by Blake Beyea
Biotypes
A Biotype is calculated by using the elevation, stream slope and ecoregion of a sample location, and is similar in community composition. Theses factors are used to predict the biotype of new sites.
There are three Biotypes: Biotype 1 (Transitional); Biotype 2 (Mountain); Biotype 3 (Xeric and Plains)
This is an approximation of the Biotypes in Colorado
Biological Threshold Development
A biological threshold is a numeric value or narrative expression that describes the expected biological condition of the aquatic community in waters with a given classified aquatic life use. These are based on a direct measurement of the aquatic community. The development of the biological thresholds are multifaceted and involves both statistical analysis, and policy related actions from the WQCC. The goal of the thresholds are to characterize biological conditions that demonstrate support of the aquatic life use. A 144 references sites were used in the statistical analysis to determine the "expected condition" for each of the 3 biotypes.
Biotype Thresholds:
This is Table 1 for Policy 10-1
High Scoring Water:
Threshold for High Scoring Waters. More than a 22 point decline in the MMI score results in an impairment conclusion.
This is Table 3 from Policy 10-1.
Photo by Patrick Bachmann
Gray Zone
The Gray Zone are the MMI scores that fall between the attainment and impairment thresholds for each Biotype. The Gray Zone only applies to waters that are classified as Warm or Cold Class 1. These waters are able to sustain a wide variety of biota, including sensitive species. If an MMI score falls between the attainment and impairment threshold, and is a class 1 waterbody, the auxiliary metrics are used to determine attainment or impairment. Waters designated as Warm or Cold Class 2 are not capable of sustaining a wide variety of biota, which includes sensitive species, and therefore do not need further confirmation of attainment or impairment from the auxiliary metrics.
Auxiliary Metrics
Hilsenhoff Biotic Index - Measure the tolerance of composition of the sample Shannon Diversity Index - Measures the diversity of the sample.
The auxiliary metrics both have to pass in order for the station to be considered attaining. The HBI score needs to be below the thresholds, and the SDI has to be above the thresholds indicated below.
Auxiliary Metric Threshold Scores used for assessment decisions.
MMI Assessment Decisions (as of January 2022). To interact with the dashboard for the individual basins, click the box in the upper right hand corner of the map, then click the basin of choice.
Assessment Decision
Using the MMI score and comparing it to the thresholds for the specific biotype, an assessment determination is made by the WQCD. When assessing the benthic macroinvertebrates, the WQCD always uses the MMI score from the most recent sample collected within the current period of record. So, if there are multiple samples collected on the same segment, but collected in different years, the most recent sample's MMI score will be used.
Once an assessment determination is made by the WQCD, the data supporting information is submitted to the WQCC through a formal rulemaking hearing process. The WQCC makes the final attainment decision during the Regulation No. 93 rulemaking process.
Listing Determinations:
- When assessing benthic macroinvertebrates and there are multiple samples collected in the same year on the same waterbody, if the MMI scores are conflicting (one station is attaining and one station is impaired) the waterbody will be placed on the M&E List.
Photo by Stephanie Baker
- If a benthic macroinvertebrate sample is collected near a biotype boundary and there is a question as to which biotype the station belongs in, the WQCD will use the designated biotype that is calculated in EDAS. If the assigned biotype is challenged, the WQCD will assess the station using both biotypes. If both MMI scores are determined to be impaired, the segment will be considered impaired. If one MMI score is determined to be impaired and the other MMI score is determined to be attaining, the biotype that was determined in EDAS will be used for the assessment decision.
- If the waterbody is determined to be impaired, and there are no other apparent pollutant(s) causing the benthic macroinvertebrates to be impaired, the segment will be identified as "provisional". An example would be, if the MMI score is determined to be impaired, and the waterbody's aquatic life use is also impaired for dissolved zinc, then the provisional tag will not be used. If the benthic macroinvertebrates are the only parameter listed for a WBID, then the WBID will be provisionally listed.
For the WQCD to propose a 303(d) listing, clear and convincing evidence is required to show impairment. The WQCC has previously determined that one MMI score is sufficient to show clear and convincing evidence for the assessment decision.
Once an assessment determination is made, and if the determination changes the status of the segment, it is proposed to the WQCC for a final decision. Based on this decision the segment is either placed, retained or removed from Regulation No. 93, Colorado's Section 303(d) List of Impaired Waters or Monitoring and Evaluation List.
Regulation No. 93 303(d) and Monitoring and Evaluation (M&E) List
This regulation establishes Colorado’s Lists of Impaired Waters. These waters include Water-Quality-limited Segments Requiring Total Maximum Daily Loads (“TMDLs”), Impaired Water Bodies with Approved TMDLs and 4b Plans, and Colorado’s Monitoring and Evaluation List. The WQCD is required by the EPA to submit a list of impaired waters every two years, and this would include waterbodies with MMI scores below the attainment thresholds.
MMI 101 slide show presented to the WQCC on March 8, 2021
This presentation was used to update the WQCC on the MMI tool version 4.0 and to give a general briefing on the history and status of the MMI. Slide 6 shows an MMI update in 2023, the WQCC approved an extension of Policy 10-1 to December 31, 2025.
Photo by Patrick Bachmann